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Research Article

Genome, Functional Gene Annotation, and Nuclear Transformation of the Heterokont Oleaginous Alga Nannochloropsis oceanica CCMP1779

  • Astrid Vieler equal contributor,

    equal contributor Contributed equally to this work with: Astrid Vieler, Guangxi Wu

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Guangxi Wu equal contributor,

    equal contributor Contributed equally to this work with: Astrid Vieler, Guangxi Wu

    Affiliation: Cell and Molecular Biology Program, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Chia-Hong Tsai,

    Affiliations: Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America, DOE–Plant Research Laboratory, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Blair Bullard,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Adam J. Cornish,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Christopher Harvey,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Ida-Barbara Reca,

    Affiliation: DOE–Plant Research Laboratory, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Chelsea Thornburg,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Rujira Achawanantakun,

    Affiliation: Deptartment of Computer Science and Engineering, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Christopher J. Buehl,

    Affiliations: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America, Cell and Molecular Biology Program, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Michael S. Campbell,

    Affiliation: Department of Human Genetics, University of Utah, Salt Lake City, Utah, United States of America

    X
  • David Cavalier,

    Affiliation: DOE–Plant Research Laboratory, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Kevin L. Childs,

    Affiliation: Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Teresa J. Clark,

    Affiliation: Department of Biological Sciences, Western Michigan University, Kalamazoo, Michigan, United States of America

    X
  • Rahul Deshpande,

    Affiliation: Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Erika Erickson,

    Affiliations: Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, United States of America, Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

    X
  • Ann Armenia Ferguson,

    Affiliation: Department of Horticulture, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Witawas Handee,

    Affiliation: Cell and Molecular Biology Program, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Que Kong,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Xiaobo Li,

    Affiliations: Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America, DOE–Plant Research Laboratory, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Bensheng Liu,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Steven Lundback,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Cheng Peng,

    Affiliations: Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America, DOE–Plant Research Laboratory, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Rebecca L. Roston,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Sanjaya,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Jeffrey P. Simpson,

    Affiliation: Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Allan TerBush,

    Affiliations: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America, Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Jaruswan Warakanont,

    Affiliation: Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Simone Zäuner,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Eva M. Farre,

    Affiliation: Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Eric L. Hegg,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Ning Jiang,

    Affiliation: Department of Horticulture, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Min-Hao Kuo,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Yan Lu,

    Affiliation: Department of Biological Sciences, Western Michigan University, Kalamazoo, Michigan, United States of America

    X
  • Krishna K. Niyogi,

    Affiliations: Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, United States of America, Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

    X
  • John Ohlrogge,

    Affiliation: Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Katherine W. Osteryoung,

    Affiliation: Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Yair Shachar-Hill,

    Affiliation: Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Barbara B. Sears,

    Affiliation: Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Yanni Sun,

    Affiliation: Deptartment of Computer Science and Engineering, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Hideki Takahashi,

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Mark Yandell,

    Affiliation: Department of Human Genetics, University of Utah, Salt Lake City, Utah, United States of America

    X
  • Shin-Han Shiu mail,

    shius@msu.edu (S-HS); benning@msu.edu (CB)

    Affiliations: Cell and Molecular Biology Program, Michigan State University, East Lansing, Michigan, United States of America, Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Christoph Benning mail

    shius@msu.edu (S-HS); benning@msu.edu (CB)

    Affiliation: Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America

    X
  • Published: November 15, 2012
  • DOI: 10.1371/journal.pgen.1003064

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