Advertisement
Research Article

Genomic Analysis of the Basal Lineage Fungus Rhizopus oryzae Reveals a Whole-Genome Duplication

  • Li-Jun Ma mail,

    lijun@broad.mit.edu (LJM); wickes@uthscsa.edu (BLW)

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • Ashraf S. Ibrahim,

    Affiliation: Los Angeles Biomedical Research Institute, Harbor-UCLA Medical Center, Torrance, California, United States of America

    X
  • Christopher Skory,

    Affiliation: Bioproducts and Biocatalysis Research, National Center for Agricultural Utilization Research, USDA-ARS, Midwest Area, Peoria, Illinois, United States of America

    X
  • Manfred G. Grabherr,

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • Gertraud Burger,

    Affiliation: Department of Biochemistry, Université de Montréal, Montreal, Canada

    X
  • Margi Butler,

    Affiliation: Department of Biochemistry, University of Otago, Otago, New Zealand

    X
  • Marek Elias,

    Affiliation: Department of Botany, Faculty of Science, Charles University, Prague, Czech Republic

    X
  • Alexander Idnurm,

    Affiliation: Division of Cell Biology and Biophysics, School of Biological Sciences, University of Missouri, Kansas City, Missouri, United States of America

    X
  • B. Franz Lang,

    Affiliation: Department of Biochemistry, Université de Montréal, Montreal, Canada

    X
  • Teruo Sone,

    Affiliation: Research Faculty of Agriculture, Hokkaido University, Sapporo, Japan

    X
  • Ayumi Abe,

    Affiliation: Research Faculty of Agriculture, Hokkaido University, Sapporo, Japan

    X
  • Sarah E. Calvo,

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • Luis M. Corrochano,

    Affiliation: Departamento de Genética, Universidad de Sevilla, Sevilla, Spain

    X
  • Reinhard Engels,

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • Jianmin Fu,

    Affiliation: Department of Microbiology and Immunology, University of Texas Health Science Center at San Antonio, San Antonio, Texas, United States of America

    X
  • Wilhelm Hansberg,

    Affiliation: Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Mexico City, Mexico

    X
  • Jung-Mi Kim,

    Affiliation: Department of Plant Biology, University of California Davis, Davis, California, United States of America

    X
  • Chinnappa D. Kodira,

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • Michael J. Koehrsen,

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • Bo Liu,

    Affiliation: Department of Plant Biology, University of California Davis, Davis, California, United States of America

    X
  • Diego Miranda-Saavedra,

    Affiliation: Cambridge Institute for Medical Research, Cambridge, United Kingdom

    X
  • Sinead O'Leary,

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • Lucila Ortiz-Castellanos,

    Affiliation: Departamento de Ingeniería Genética, Unidad Irapuato, Centro de Investigación y de Estudios Avanzados del IPN, Mexico City, Mexico

    X
  • Russell Poulter,

    Affiliation: Department of Biochemistry, University of Otago, Otago, New Zealand

    X
  • Julio Rodriguez-Romero,

    Affiliation: Departamento de Genética, Universidad de Sevilla, Sevilla, Spain

    X
  • José Ruiz-Herrera,

    Affiliation: Departamento de Ingeniería Genética, Unidad Irapuato, Centro de Investigación y de Estudios Avanzados del IPN, Mexico City, Mexico

    X
  • Yao-Qing Shen,

    Affiliation: Department of Biochemistry, Université de Montréal, Montreal, Canada

    X
  • Qiandong Zeng,

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • James Galagan,

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • Bruce W. Birren,

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • Christina A. Cuomo equal contributor,

    equal contributor Contributed equally to this work with: Christina A. Cuomo, Brian L. Wickes

    Affiliation: The Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America

    X
  • Brian L. Wickes equal contributor mail

    equal contributor Contributed equally to this work with: Christina A. Cuomo, Brian L. Wickes

    lijun@broad.mit.edu (LJM); wickes@uthscsa.edu (BLW)

    Affiliation: Department of Microbiology and Immunology, University of Texas Health Science Center at San Antonio, San Antonio, Texas, United States of America

    X
  • Published: July 03, 2009
  • DOI: 10.1371/journal.pgen.1000549

Media Coverage of this Article

Found additional news media or blog coverage for the article? Please let us know.