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Research Article

Comparative Genomics of Plant-Associated Pseudomonas spp.: Insights into Diversity and Inheritance of Traits Involved in Multitrophic Interactions

  • Joyce E. Loper mail,

    Joyce.Loper@ars.usda.gov

    Affiliations: Agricultural Research Service, U.S. Department of Agriculture, Corvallis, Oregon, United States of America, Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, United States of America

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  • Karl A. Hassan,

    Affiliation: Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia

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  • Dmitri V. Mavrodi,

    Affiliation: Department of Plant Pathology, Washington State University, Pullman, Washington, United States of America

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  • Edward W. Davis II,

    Affiliation: Agricultural Research Service, U.S. Department of Agriculture, Corvallis, Oregon, United States of America

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  • Chee Kent Lim,

    Affiliation: Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia

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  • Brenda T. Shaffer,

    Affiliation: Agricultural Research Service, U.S. Department of Agriculture, Corvallis, Oregon, United States of America

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  • Liam D. H. Elbourne,

    Affiliation: Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia

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  • Virginia O. Stockwell,

    Affiliation: Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, United States of America

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  • Sierra L. Hartney,

    Affiliation: Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, United States of America

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  • Katy Breakwell,

    Affiliation: Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia

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  • Marcella D. Henkels,

    Affiliation: Agricultural Research Service, U.S. Department of Agriculture, Corvallis, Oregon, United States of America

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  • Sasha G. Tetu,

    Affiliation: Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia

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  • Lorena I. Rangel,

    Affiliation: Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, United States of America

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  • Teresa A. Kidarsa,

    Affiliation: Agricultural Research Service, U.S. Department of Agriculture, Corvallis, Oregon, United States of America

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  • Neil L. Wilson,

    Affiliation: Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia

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  • Judith E. van de Mortel,

    Affiliation: Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands

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  • Chunxu Song,

    Affiliation: Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands

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  • Rachel Blumhagen,

    Affiliation: Agricultural Research Service, U.S. Department of Agriculture, Corvallis, Oregon, United States of America

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  • Diana Radune,

    Affiliation: The J. Craig Venter Institute, Rockville, Maryland, United States of America

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  • Jessica B. Hostetler,

    Affiliation: The J. Craig Venter Institute, Rockville, Maryland, United States of America

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  • Lauren M. Brinkac,

    Affiliation: The J. Craig Venter Institute, Rockville, Maryland, United States of America

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  • A. Scott Durkin,

    Affiliation: The J. Craig Venter Institute, Rockville, Maryland, United States of America

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  • Daniel A. Kluepfel,

    Affiliation: Agricultural Research Service, U.S. Department of Agriculture, Davis, California, United States of America

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  • W. Patrick Wechter,

    Affiliation: Agricultural Research Service, U.S. Department of Agriculture, Charleston, South Carolina, United States of America

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  • Anne J. Anderson,

    Affiliation: Department of Biology, Utah State University, Logan, Utah, United States of America

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  • Young Cheol Kim,

    Affiliation: Institute of Environmentally-Friendly Agriculture, Chonnam National University, Gwangju, Korea

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  • Leland S. Pierson III,

    Affiliation: Department of Plant Pathology and Microbiology, Texas A&M University, College Station, Texas, United States of America

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  • Elizabeth A. Pierson,

    Affiliation: Department of Horticultural Sciences, Texas A&M University, College Station, Texas, United States of America

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  • Steven E. Lindow,

    Affiliation: Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, United States of America

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  • Donald Y. Kobayashi,

    Affiliation: Department of Plant Biology and Pathology, Rutgers, The State University of New Jersey, New Brunswick, New Jersey, United States of America

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  • Jos M. Raaijmakers,

    Affiliation: Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands

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  • David M. Weller,

    Affiliation: Agricultural Research Service, U.S. Department of Agriculture, Pullman, Washington, United States of America

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  • Linda S. Thomashow,

    Affiliation: Agricultural Research Service, U.S. Department of Agriculture, Pullman, Washington, United States of America

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  • Andrew E. Allen,

    Affiliation: The J. Craig Venter Institute, San Diego, California, United States of America

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  • Ian T. Paulsen

    Affiliation: Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia

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  • Published: July 05, 2012
  • DOI: 10.1371/journal.pgen.1002784

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