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Research Article

Genome-Wide Patterns of Nucleotide Polymorphism in Domesticated Rice

  • Ana L Caicedo equal contributor,

    equal contributor Contributed equally to this work with: Ana L Caicedo, Scott H Williamson

    Affiliation: Department of Genetics, North Carolina State University, Raleigh, North Carolina, United States of America

    ¤a Current address: Department of Biology, University of Massachusetts, Amherst, Massachusetts, United States of America

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  • Scott H Williamson equal contributor,

    equal contributor Contributed equally to this work with: Ana L Caicedo, Scott H Williamson

    Affiliation: Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, New York, United States of America

    X
  • Ryan D Hernandez,

    Affiliation: Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, New York, United States of America

    X
  • Adam Boyko,

    Affiliation: Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, New York, United States of America

    X
  • Adi Fledel-Alon,

    Affiliation: Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, New York, United States of America

    ¤b Current address: Department of Human Genetics, University of Chicago, Chicago, Illinois, United States of America

    X
  • Thomas L York,

    Affiliation: Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, New York, United States of America

    X
  • Nicholas R Polato,

    Affiliation: Department of Plant Breeding and Genetics, Cornell University, Ithaca, New York, United States of America

    X
  • Kenneth M Olsen,

    Affiliation: Department of Genetics, North Carolina State University, Raleigh, North Carolina, United States of America

    ¤c Current address: Department of Biology, Washington University, St. Louis, Missouri, United States of America

    X
  • Rasmus Nielsen,

    Affiliation: Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, New York, United States of America

    ¤d Current address: Centre for Bioinformatics, University of Copenhagen, Denmark

    X
  • Susan R McCouch,

    Affiliation: Department of Plant Breeding and Genetics, Cornell University, Ithaca, New York, United States of America

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  • Carlos D Bustamante mail,

    To whom correspondence should be addressed. E-mail: cdb28@cornell.edu (CDB); mp132@nyu.edu (MDP)

    Affiliation: Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, New York, United States of America

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  • Michael D Purugganan mail

    To whom correspondence should be addressed. E-mail: cdb28@cornell.edu (CDB); mp132@nyu.edu (MDP)

    Affiliations: Department of Genetics, North Carolina State University, Raleigh, North Carolina, United States of America, Department of Biology, New York University, New York, New York, United States of America, Center for Comparative Functional Genomics, New York University, New York, New York, United States of America

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  • Published: September 28, 2007
  • DOI: 10.1371/journal.pgen.0030163

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